Instruments/Zeiss-Elyra-7.md

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 # Manuals & Guides
 
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 ## Startup & Shutdown
 
 <details>
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 </summary>  
 
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 1. The Elyra microscope has only one switch that needs to be turned on (Main Switch), which is a turn knob. Do not turn any other switches on/off. Next, you will need to switch on the computer under the table. 
 
 ![PXL_20240320_095753421](uploads/6243a65ae74f7d9c37bec3fa7fe80a35/PXL_20240320_095753421.jpg)
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 ![PXL_20240320_091545142](uploads/771b95ca313e0a923254dbf26539bca8/PXL_20240320_091545142.jpg){width=50%} ![PXL_20240320_092901039](uploads/abfc3c39fba668f2f6dfff165d7c3a91/PXL_20240320_092901039.jpg){width=48%}
 
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 </details>
 
 <details>
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 </summary>  
 
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 - Close Zen Black
 - Press the Load position on the touch panel
 - Clean immersion objectives with lens cleaning paper
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 Always make sure that the system is back at 27°C and the CO<sub>2</sub> is off when you have done any live cell imaging.
 
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 </details>
 
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-## `Environmental Control`
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+## Environmental Control
 
 [Zeiss_Elyra_Environmental_controls_01.pdf](uploads/9e4a1088f421fd1742a2dd0076f3a89a/Zeiss_Elyra_Environmental_controls_01.pdf)
 
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 ## `Setting up Lattice SIM`
 
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 [Zeiss_Elyra_Setting_up_Lattice_SIM.pdf](uploads/8a812e218450d11bab8caa13642c6510/Zeiss_Elyra_Setting_up_Lattice_SIM.pdf)
 
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 ## Setting up TIRF
 [Zeiss_Elyra_Setting_up_TIRF_imaging.pdf](uploads/d5abb8b971c53cbf7a21b318be59d1c3/Zeiss_Elyra_Setting_up_TIRF_imaging.pdf)
 
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 5. Save the results in order to correct your images later on
 6. You can apply your correction together with the SIM processing
 
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 # Data Processing
 
 ## Data Handling and Transfer